Overview

The Scientific Seminar Series is designed to reach the microbiology community to disseminate knowledge across its professional networks. The events are designed as a regularly repeated series of short (typically 1–2 hour) online meetings.

The Journal of Medical Microbiology (JMM) monthly seminar series is designed to showcase high-quality and timely research from the journal’s key authors. JMM welcomes everything from laboratory research to clinical trials, including bacteriology, virology, mycology, and parasitology. The JMM seminars will reflect this same comprehensive scientific content.

Organising Committee 2023/24
  • Professor Kalai Mathee (Lifetime Omics, Miami, USA)
  • Professor Jose-Luis Puente (Universidad Nacional Autonoma de Mexico)
Organising Committee 2022/23
  • Professor Kalai Mathee (Lifetime Omics, Miami, USA)
  • Dr Norman Fry (UK Health Security Agency, UK)
  • Dr Tim Inglis (University of Western Australia, Crawley, Australia)

Sign up to attend this series of seminars via the 'Registration' tab. Instructions on how to join the Zoom session will be sent ahead of each seminar.

Please note all times listed in the programme are UK time.

Programme

Session

Session View

Friday 28 November, Afternoon

Global genomic pathogen surveillance to inform vaccine design: a decade-long expedition in pneumococcal genomics

Background: Streptococcus pneumoniae is one of the leading causes of bacterial infection in children under five. The current Pneumococcal Conjugate Vaccine (PCV), targeting up to 20 of 107 known serotypes, has significantly reduced global mortality. Yet, the emergence of non-PCV serotypes is undermining vaccine effectiveness. To address this, we conducted the Global Pneumococcal Sequencing Project to assess PCV's impact on pneumococcal populations, aiming to inform future vaccine design. Methods: We whole-genome sequenced 21,155 pneumococcal isolates with detailed epidemiological data from 59 countries, 1989-2018. We defined a novel genomic definition of pneumococcal lineage (or Global Pneumococcal Sequence Cluster, GPSC) using PopPUNK, and inferred serotype, and antimicrobial profile of 19 antibiotics from genome data. Results: We clustered a global collection of pneumococcal genomes into 968 lineages. Globally, the top ten lineages contributing to vaccine evasion were identified, most of which were globally-spreading and capable of expressing multiple serotypes. An investigation into one of these lineages GPSC10 revealed its recombinogenic nature to acquire resistance genes and undergo frequent serotype switching. GPSC10 has mediated vaccine evasion across multiple countries through expanding its non-PCV serotypes components under the vaccine-selective pressure. After the introduction of PCV13, GPSC10 expressing serotype 24F was responsible for the increase in invasive disease in Europe and Latin America. These findings led to the inclusion of serotype 24F in the forthcoming 25-valent PCV (IVT-25). Conclusions: This study is a pioneering example of using pathogen genomic surveillance to inform bacterial vaccine design, highlighting serotype-based strategy limitations against vaccine-evading strains capable of expressing multiple serotypes.

Organisers

Registration

Sign up to attend this series of seminars below. You will receive an email with information about each upcoming presentation, including joining instructions, a Zoom link, and any other relevant information, two days before each seminar. A second reminder email will be sent one hour before each seminar. Unfortunately, if you have signed up less than one hour before the seminar, you will not be able to attend until the next seminar in the series.

Please note all times listed in the programme are UK time.


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Technology
All seminars will be run via Zoom, a link for which will be sent to you via email prior to the meeting. Please ensure you have updated to the latest version of the Zoom desktop or mobile application (version 5.3 or higher is recommended).